2DAT Transcription date Dec 14, 2005
title Solution Structure Of The Bromodomain Of Human Swisnf Related Matrix Associated Actin Dependent Regulator Of Cromatin Subfamily A Member 2
authors M.Yoneyama, T.Kigawa, K.Saito, N.Tochio, S.Koshiba, M.Inoue, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Possible Global Transcription Activator Snf2l2
Chain: A
Fragment: Bromodomain
Synonym: Swisnf Related Matrix Associated Actin Dependent Regulator Of Chromatin Subfamily A Member 2, Snf2-Alpha;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Smarca2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050302-31
Other_details: Cell-Free Protein Synthesis
methodSolution NMR

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (659 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2DAT
  • Retrieve 2DAT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DAT from S2C, [Save to disk]
  • View 2DAT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DAT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2DAT, from MSDmotif at EBI
  • Fold representative 2dat from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dat_A] [2dat]
  • SWISS-PROT database: [P51531]
  • Domain organization of [SMCA2_HUMAN] by SWISSPFAM
  • Domain found in 2DAT: [BROMO ] by SMART
  • Other resources with information on 2DAT
  • Community annotation for 2DAT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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