2DB3		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ANP, MG	enzyme
Gene Ontology	Chain Function Process Component C, D, B, A
Primary reference	Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa., Sengoku T, Nureki O, Nakamura A, Kobayashi S, Yokoyama S, Cell. 2006 Apr 21;125(2):287-300. PMID:16630817

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (304 Kb) [Save to disk] Biological Unit Coordinates (2db3.pdb1.gz) 77 Kb Biological Unit Coordinates (2db3.pdb2.gz) 78 Kb Biological Unit Coordinates (2db3.pdb3.gz) 79 Kb Biological Unit Coordinates (2db3.pdb4.gz) 78 Kb LPC: Ligand-Protein Contacts for 2DB3 CSU: Contacts of Structural Units for 2DB3 Likely Quarternary Molecular Structure file(s) for 2DB3 Structure Factors (1006 Kb) Retrieve 2DB3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DB3 from S2C, [Save to disk] Re-refined 2db3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DB3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2db3] [2db3_A] [2db3_B] [2db3_C] [2db3_D] [2db3_E] [2db3_F] [2db3_G] [2db3_H] SWISS-PROT database: [P09052] Domains found in 2DB3: [DEXDc] [HELICc ] by SMART

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