2DDF Hydrolase date Jan 28, 2006
title Crystal Structure Of Tace In Complex With Tapi-2
authors P.Orth
compound source
Molecule: Adam 17
Chain: A, B
Synonym: A Disintegrin And Metalloproteinase Domain 17, Tnf Converting Enzyme, Tnf-Alpha Convertase, Snake Venom-Like P Cd156b Antigen;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Adam17, Csvp, Tace
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111
symmetry Space Group: P 21 21 21
R_factor 0.204 R_Free 0.230
length a length b length c angle alpha angle beta angle gamma
74.394 75.639 103.713 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand CA, CIT, IMD, INN, IPA, ZN enzyme Hydrolase E.C. BRENDA
A, B

Primary referenceStabilization of the autoproteolysis of TNF-alpha converting enzyme (TACE) results in a novel crystal form suitable for structure-based drug design studies., Ingram RN, Orth P, Strickland CL, Le HV, Madison V, Beyer BM, Protein Eng Des Sel. 2006 Apr;19(4):155-61. Epub 2006 Feb 3. PMID:16459338
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (2ddf.pdb1.gz) 46 Kb
  • Biological Unit Coordinates (2ddf.pdb2.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 2DDF
  • CSU: Contacts of Structural Units for 2DDF
  • Likely Quarternary Molecular Structure file(s) for 2DDF
  • Structure Factors (1248 Kb)
  • Retrieve 2DDF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DDF from S2C, [Save to disk]
  • Re-refined 2ddf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2DDF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DDF
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2DDF, from MSDmotif at EBI
  • Fold representative 2ddf from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ddf_A] [2ddf] [2ddf_B]
  • SWISS-PROT database: [P78536]
  • Belongs to the sheddase (sheddase) family according to TCDB.
  • Domain organization of [ADA17_HUMAN] by SWISSPFAM
  • Other resources with information on 2DDF
  • Community annotation for 2DDF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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