2DDO		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ATP, MG, PO4	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Crystal structure of pyridoxal kinase from the Escherichia coli pdxK gene: implications for the classification of pyridoxal kinases., Safo MK, Musayev FN, di Salvo ML, Hunt S, Claude JB, Schirch V, J Bacteriol. 2006 Jun;188(12):4542-52. PMID:16740960

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk] Biological Unit Coordinates (2ddo.pdb1.gz) 86 Kb LPC: Ligand-Protein Contacts for 2DDO CSU: Contacts of Structural Units for 2DDO Likely Quarternary Molecular Structure file(s) for 2DDO Structure Factors (80 Kb) Retrieve 2DDO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DDO from S2C, [Save to disk] Re-refined 2ddo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DDO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ddo] [2ddo_A] [2ddo_B] SWISS-PROT database: [P40191]

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