2DEO		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MSE	enzyme
Primary reference	Molecular Structure of a Novel Membrane Protease Specific for a Stomatin Homolog from the Hyperthermophilic Archaeon Pyrococcus horikoshii., Yokoyama H, Matsui E, Akiba T, Harata K, Matsui I, J Mol Biol. 2006 May 12;358(4):1152-64. Epub 2006 Mar 9. PMID:16574150

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk] Biological Unit Coordinates (2deo.pdb1.gz) 63 Kb LPC: Ligand-Protein Contacts for 2DEO CSU: Contacts of Structural Units for 2DEO Likely Quarternary Molecular Structure file(s) for 2DEO Structure Factors (105 Kb) Retrieve 2DEO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DEO from S2C, [Save to disk] Re-refined 2deo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DEO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2deo] [2deo_A] [2deo_B] SWISS-PROT database: [O59179] Belongs to the stomatin/podocin/band 7/nephrosis.2/spfh (stomatin) family according to TCDB.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---