2DHS Rna Binding Protein date Mar 25, 2006
title Solution Structure Of Nucleic Acid Binding Protein Cugbp1ab Binding Study With Dna And Rna
authors Y.L.Xia, K.Y.Jun, Q.Zhu, X.G.Han, H.Zhang, L.Timchenko, M.Swanson,
compound source
Molecule: Cug Triplet Repeat Rna-Binding Protein 1
Chain: A
Fragment: Rrm1 And Rrm2
Synonym: Cug-Bp1, Rna-Binding Protein Brunol-2, Deadenylati Cug-Bp, 50 Kda Nuclear Polyadenylated Rna-Binding Protein,
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cugbp1 (Amino Acids 1 - 187)
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (398 Kb) [Save to disk]
  • Biological Unit Coordinates (2dhs.pdb1.gz) 57 Kb
  • CSU: Contacts of Structural Units for 2DHS
  • Original NMR restraints for 2DHS from PDB
  • Retrieve 2DHS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DHS from S2C, [Save to disk]
  • View 2DHS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DHS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2DHS, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dhs] [2dhs_A]
  • SWISS-PROT database: [Q92879]
  • Domain organization of [CELF1_HUMAN] by SWISSPFAM
  • Domain found in 2DHS: [RRM ] by SMART
  • Other resources with information on 2DHS
  • Community annotation for 2DHS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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