2DIE		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA, NA	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Ancestral sequence evolutionary trace and crystal structure analyses of alkaline alpha-amylase from Bacillus sp. KSM-1378 to clarify the alkaline adaptation process of proteins., Shirai T, Igarashi K, Ozawa T, Hagihara H, Kobayashi T, Ozaki K, Ito S, Proteins. 2007 Feb 15;66(3):600-10. PMID:17154418

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (2die.pdb1.gz) 82 Kb LPC: Ligand-Protein Contacts for 2DIE CSU: Contacts of Structural Units for 2DIE Likely Quarternary Molecular Structure file(s) for 2DIE Structure Factors (450 Kb) Retrieve 2DIE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DIE from S2C, [Save to disk] Re-refined 2die structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DIE in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2die] [2die_A] SWISS-PROT database: [O82839] Domain found in 2DIE: [Aamy ] by SMART

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