2DIQ Rna Binding Protein date Mar 30, 2006
title Solution Structure Of The Tudor Domain Of Tudor And Kh Domai Containing Protein
authors W.Dang, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyam Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Tudor And Kh Domain-Containing Protein
Chain: A
Fragment: Tudor Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tdrkh, Tdrd2
Expression_system: Cell Free Synthesis
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050905-13
Other_details: Cell Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (544 Kb) [Save to disk]
  • Biological Unit Coordinates (2diq.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 2DIQ
  • Original NMR restraints for 2DIQ from PDB
  • Retrieve 2DIQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DIQ from S2C, [Save to disk]
  • View 2DIQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DIQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2DIQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2diq] [2diq_A]
  • SWISS-PROT database: [Q9Y2W6]
  • Domain organization of [TDRKH_HUMAN] by SWISSPFAM
  • Domain found in 2DIQ: [TUDOR ] by SMART
  • Other resources with information on 2DIQ
  • Community annotation for 2DIQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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