2DIX Rna Binding Protein date Mar 30, 2006
title Solution Structure Of The Dsrm Domain Of Protein Activator O Interferon-Induced Protein Kinase
authors W.Dang, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyam Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Interferon-Inducible Double Stranded Rna-Dependen Kinase Activator A;
Chain: A
Fragment: Dsrm Domain
Synonym: Protein Activator Of The Interferon-Induced Protei Protein Kinase, Interferon-Inducible Double Stranded Rna De Activator, Pkr-Associated Protein X, Hypothetical Protein Dkfzp564i0123;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Prkra, Dkfzp564i0123, Pact
Expression_system: Cell Free Synthesis
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050912-05
Other_details: Cell Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (419 Kb) [Save to disk]
  • Biological Unit Coordinates (2dix.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 2DIX
  • Original NMR restraints for 2DIX from PDB
  • Retrieve 2DIX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DIX from S2C, [Save to disk]
  • View 2DIX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DIX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2DIX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dix] [2dix_A]
  • SWISS-PROT database: [O75569]
  • Domain organization of [PRKRA_HUMAN] by SWISSPFAM
  • Domain found in 2DIX: [DSRM ] by SMART
  • Other resources with information on 2DIX
  • Community annotation for 2DIX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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