2DJI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FAD, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structures of pyruvate oxidase from Aerococcus viridans with cofactors and with a reaction intermediate reveal the flexibility of the active-site tunnel for catalysis., Juan EC, Hoque MM, Hossain MT, Yamamoto T, Imamura S, Suzuki K, Sekiguchi T, Takenaka A, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Nov 1;63(Pt, 11):900-7. Epub 2007 Oct 20. PMID:18007037
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (2dji.pdb1.gz) 414 Kb
  • LPC: Ligand-Protein Contacts for 2DJI
  • CSU: Contacts of Structural Units for 2DJI
  • Likely Quarternary Molecular Structure file(s) for 2DJI
  • Structure Factors (998 Kb)
  • Retrieve 2DJI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DJI from S2C, [Save to disk]
  • Re-refined 2dji structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2DJI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dji] [2dji_A]
  • SWISS-PROT database: [A9X9K8]

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science