2DL4 Signaling Protein date Apr 17, 2006
title Solution Structure Of The First Sh3 Domain Of Stac Protein
authors X.R.Qin, T.Suetake, F.Hayashi, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Protein Stac
Chain: A
Fragment: Sh3 Domain
Synonym: Src Homology 3 And Cysteine-Rich Domain Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Stac
Expression_system: Cell Free Synthesis
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050613-10
Other_details: Cell Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (347 Kb) [Save to disk]
  • Biological Unit Coordinates (2dl4.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 2DL4
  • Original NMR restraints for 2DL4 from PDB
  • Retrieve 2DL4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DL4 from S2C, [Save to disk]
  • View 2DL4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DL4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2DL4, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dl4_A] [2dl4]
  • SWISS-PROT database: [Q99469]
  • Belongs to the endophilin (endophilin) family according to TCDB.
  • Domain organization of [STAC_HUMAN] by SWISSPFAM
  • Domain found in 2DL4: [SH3 ] by SMART
  • Other resources with information on 2DL4
  • Community annotation for 2DL4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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