2DMP Solution structure of the third homeobox domain of Zinc fingers and homeoboxes protein 2 date
authors Ohnishi, S., Sasagawa, A., Saito, K., Koshiba, S., Inoue, M., Kigawa, T., Yokoyama, S., RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 20 Modelsresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (463 Kb) [Save to disk]
  • Biological Unit Coordinates (2dmp.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 2DMP
  • Retrieve 2DMP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DMP from S2C, [Save to disk]
  • View 2DMP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DMP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2DMP, from MSDmotif at EBI
  • Fold representative 2dmp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dmp] [2dmp_A]
  • SWISS-PROT database: [Q9Y6X8]
  • Domain organization of [ZHX2_HUMAN] by SWISSPFAM
  • Domain found in 2DMP: [HOX ] by SMART
  • Other resources with information on 2DMP
  • Community annotation for 2DMP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science