2DMU Dna Binding Protein date Apr 24, 2006
title Solution Structure Of The Homeobox Domain Of Homeobox Protein Goosecoid
authors S.Ohnishi, M.Sato, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Homeobox Protein Goosecoid
Chain: A
Fragment: Homeobox Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gsc
Expression_system: Cell Free Synthesis
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050919-23
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (385 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2DMU
  • Retrieve 2DMU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DMU from S2C, [Save to disk]
  • View 2DMU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DMU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2DMU, from MSDmotif at EBI
  • Fold representative 2dmu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dmu_A] [2dmu]
  • SWISS-PROT database: [P56915]
  • Domain organization of [GSC_HUMAN] by SWISSPFAM
  • Domain found in 2DMU: [HOX ] by SMART
  • Other resources with information on 2DMU
  • Community annotation for 2DMU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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