2DNK Rna Binding Protein date Apr 26, 2006
title Solution Structure Of Rna Binding Domain In Bruno-Like 4 Rna Protein
authors K.Tsuda, Y.Muto, M.Inoue, T.Kigawa, T.Terada, M.Shirouzu, S.Yokoya Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Bruno-Like 4, Rna Binding Protein
Chain: A
Fragment: Rna Recognition Motif
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Brunol4
Expression_system: Cell Free Synthesis
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050815-11
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (506 Kb) [Save to disk]
  • Biological Unit Coordinates (2dnk.pdb1.gz) 25 Kb
  • CSU: Contacts of Structural Units for 2DNK
  • Original NMR restraints for 2DNK from PDB
  • Retrieve 2DNK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DNK from S2C, [Save to disk]
  • View 2DNK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DNK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2DNK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dnk_A] [2dnk]
  • SWISS-PROT database: [Q9BZC1]
  • Domain organization of [CELF4_HUMAN] by SWISSPFAM
  • Domain found in 2DNK: [RRM ] by SMART
  • Other resources with information on 2DNK
  • Community annotation for 2DNK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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