2DUD	Dna Binding Protein	date	Jul 21, 2006
title	Crystal Structure Of Human Mitochondrial Single-Stranded Dna Protein(Hmtssb)
authors	X.Dong, Y.Bessho, M.Shirouzu, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound		source
Molecule: Single-Stranded Dna-Binding Protein Chain: A, B Fragment: Single-Stranded Dna-Binding Protein, Ssb Synonym: Mt-Ssb, Mtssb, Pwp1-Interacting Protein 17 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system_vector_type: Plasmid Expression_system_plasmid: Px050223-18 Other_details: Cell-Free Protein Synthesis
symmetry	Space Group: P 65 2 2	R_factor 0.259 R_Free 0.287
crystal cell	length a length b length c angle alpha angle beta angle gamma 106.900 106.900 90.240 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.70 Å
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk] Biological Unit Coordinates (2dud.pdb1.gz) 31 Kb Biological Unit Coordinates (2dud.pdb2.gz) 62 Kb CSU: Contacts of Structural Units for 2DUD Likely Quarternary Molecular Structure file(s) for 2DUD Structure Factors (85 Kb) Retrieve 2DUD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DUD from S2C, [Save to disk] Re-refined 2dud structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DUD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2DUD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2DUD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2dud_B] [2dud] [2dud_A] SWISS-PROT database: [Q04837] Domain organization of [SSBP_HUMAN] by SWISSPFAM

Other resources with information on 2DUD

Community annotation for 2DUD at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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