2DVN date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, IMP, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes., Lokanath NK, Pampa KJ, Takio K, Kunishima N, J Mol Biol. 2008 Jan 25;375(4):1013-25. Epub 2007 Nov 13. PMID:18062990
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (2dvn.pdb1.gz) 71 Kb
  • LPC: Ligand-Protein Contacts for 2DVN
  • CSU: Contacts of Structural Units for 2DVN
  • Likely Quarternary Molecular Structure file(s) for 2DVN
  • Structure Factors (562 Kb)
  • Retrieve 2DVN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DVN from S2C, [Save to disk]
  • Re-refined 2dvn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2DVN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dvn] [2dvn_A] [2dvn_B]
  • SWISS-PROT database: [O59580]

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