2DWH Metal Binding Protein date Aug 12, 2006
title Crystal Structure Of N-Acetylglucosamine Complex Of Bovine L C-Lobe At 2.8 A Resolution
authors R.Mir, A.S.Ethayathulla, N.Singh, S.Sharma, A.Bhushan, P.Kaur, T.P
compound source
Molecule: Lactotransferrin
Chain: A
Fragment: Residues 342-686
Mutation: Yes
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: P 1 21 1
R_factor 0.194 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.584 50.488 66.030 90.00 107.73 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand BMA, CO3, FE, NAG, SO4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (2dwh.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 2DWH
  • CSU: Contacts of Structural Units for 2DWH
  • Likely Quarternary Molecular Structure file(s) for 2DWH
  • Retrieve 2DWH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DWH from S2C, [Save to disk]
  • View 2DWH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DWH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2DWH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dwh] [2dwh_A]
  • SWISS-PROT database: [P24627]
  • Domain organization of [TRFL_BOVIN] by SWISSPFAM
  • Domain found in 2DWH: [TR_FER ] by SMART
  • Other resources with information on 2DWH
  • Community annotation for 2DWH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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