2DX1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the rac activator, Asef, reveals its autoinhibitory mechanism., Murayama K, Shirouzu M, Kawasaki Y, Kato-Murayama M, Hanawa-Suetsugu K, Sakamoto A, Katsura Y, Suenaga A, Toyama M, Terada T, Taiji M, Akiyama T, Yokoyama S, J Biol Chem. 2007 Feb 16;282(7):4238-42. Epub 2006 Dec 26. PMID:17190834
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (2dx1.pdb1.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 2DX1
  • CSU: Contacts of Structural Units for 2DX1
  • Likely Quarternary Molecular Structure file(s) for 2DX1
  • Structure Factors (328 Kb)
  • Retrieve 2DX1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DX1 from S2C, [Save to disk]
  • Re-refined 2dx1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2DX1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dx1] [2dx1_A]
  • SWISS-PROT database: [Q9NR80]
  • Domains found in 2DX1: [PH] [RhoGEF] [SH3 ] by SMART

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