2E5G Structural Genomics, Unknown Function date Dec 21, 2006
title Solution Structure Of Rna Binding Domain In Rna Binding Moti 21
authors K.Tsuda, Y.Muto, M.Inoue, T.Kigawa, T.Terada, M.Shirouzu, S.Yokoya Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: U6 Snrna-Specific Terminal Uridylyltransferase 1
Chain: A
Fragment: Rna Recognition Motif
Synonym: U6-Tutase, Rna-Binding Protein 21, Rna-Binding Mot 21;
Ec: 2.7.7.52
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tut1, Rbm21
Expression_system: Cell-Free Synthesis
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060227-23
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.7.52 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (467 Kb) [Save to disk]
  • Biological Unit Coordinates (2e5g.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 2E5G
  • Original NMR restraints for 2E5G from PDB
  • Retrieve 2E5G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2E5G from S2C, [Save to disk]
    • View 2E5G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2E5G
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2E5G, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2e5g] [2e5g_A]
  • SWISS-PROT database: [Q9H6E5]
  • Domain organization of [TUT1_HUMAN] by SWISSPFAM
  • Domain found in 2E5G: [RRM ] by SMART
    • Other resources with information on 2E5G
  • Community annotation for 2E5G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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