2E5S Transcription date Dec 22, 2006
title Solution Structure Of The Zf-Ccchx2 Domain Of Muscleblind-Li Isoform 1 [Homo Sapiens]
authors W.Dang, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyam Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Otthump00000018578
Chain: A
Fragment: Zf-Ccchx2 Domain, Residues 8-98
Synonym: Muscleblind-Like 2, Drosophila, Muscleblind-Like 2 1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mbnl2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060327-05
Other_details: Cell Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the RNA binding domain in the human muscleblind-like protein 2., He F, Dang W, Abe C, Tsuda K, Inoue M, Watanabe S, Kobayashi N, Kigawa T, Matsuda T, Yabuki T, Aoki M, Seki E, Harada T, Tomabechi Y, Terada T, Shirouzu M, Tanaka A, Guntert P, Muto Y, Yokoyama S, Protein Sci. 2009 Jan;18(1):80-91. PMID:19177353
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (495 Kb) [Save to disk]
  • Biological Unit Coordinates (2e5s.pdb1.gz) 25 Kb
  • LPC: Ligand-Protein Contacts for 2E5S
  • CSU: Contacts of Structural Units for 2E5S
  • Original NMR restraints for 2E5S from PDB
  • Retrieve 2E5S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2E5S from S2C, [Save to disk]
  • View 2E5S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2E5S
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2E5S, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2e5s] [2e5s_A]
  • SWISS-PROT database: [Q5VZF2]
  • Domain organization of [MBNL2_HUMAN] by SWISSPFAM
  • Domain found in 2E5S: [ZnF_C3H1 ] by SMART
  • Other resources with information on 2E5S
  • Community annotation for 2E5S at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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