2E5U Hydrolase date Dec 25, 2006
title C-Terminal Domain Of Epsilon Subunit Of F1f0-Atp Synthase Fr Thermophilic Bacillus Ps3
authors H.Yagi, H.Akutsu
compound source
Molecule: Atp Synthase Epsilon Chain
Chain: A
Fragment: C-Terminal Domain, Residues 88-127
Synonym: Atp Synthase F1 Sector Epsilon Subunit
Ec: 3.6.3.14
Engineered: Yes
 Organism_scientific: Bacillus Sp. Ps3
Organism_taxid: 2334
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet32a
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.3.14 BRENDA
Primary referenceStructures of the thermophilic F1-ATPase {varepsilon} subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1., Yagi H, Kajiwara N, Tanaka H, Tsukihara T, Kato-Yamada Y, Yoshida M, Akutsu H, Proc Natl Acad Sci U S A. 2007 Jul 3;104(27):11233-8. Epub 2007 Jun 20. PMID:17581881
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (231 Kb) [Save to disk]
  • Biological Unit Coordinates (2e5u.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 2E5U
  • Retrieve 2E5U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2E5U from S2C, [Save to disk]
    • View 2E5U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2E5U
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2E5U, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2e5u] [2e5u_A]
  • SWISS-PROT database: [Q5KUJ4]
  • Domain organization of [ATPE_GEOKA] by SWISSPFAM
    • Other resources with information on 2E5U
  • Community annotation for 2E5U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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