2E5Y	Hydrolase	date	Dec 25, 2006
title	Epsilon Subunit And Atp Complex Of F1f0-Atp Synthase From Th Thermophilic Bacillus Ps3
authors	H.Yagi, H.Akutsu
compound		source
Molecule: Atp Synthase Epsilon Chain Chain: A, B Synonym: Atp Synthase F1 Sector Epsilon Subunit Ec: 3.6.3.14 Engineered: Yes		Organism_scientific: Bacillus Sp. Ps3 Organism_taxid: 2334 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet32a
symmetry	Space Group: P 21 21 21	R_factor 0.200 R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma 37.480 64.917 103.944 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.92 Å
ligand	ATP	enzyme	Hydrolase E.C.3.6.3.14 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structures of the thermophilic F1-ATPase {varepsilon} subunit suggesting ATP-regulated arm motion of its C-terminal domain in F1., Yagi H, Kajiwara N, Tanaka H, Tsukihara T, Kato-Yamada Y, Yoshida M, Akutsu H, Proc Natl Acad Sci U S A. 2007 Jul 3;104(27):11233-8. Epub 2007 Jun 20. PMID:17581881

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (2e5y.pdb1.gz) 46 Kb LPC: Ligand-Protein Contacts for 2E5Y CSU: Contacts of Structural Units for 2E5Y Likely Quarternary Molecular Structure file(s) for 2E5Y Structure Factors (348 Kb) Retrieve 2E5Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2E5Y from S2C, [Save to disk] Re-refined 2e5y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2E5Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2E5Y

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2E5Y, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2e5y_B] [2e5y_A] [2e5y] SWISS-PROT database: [Q5KUJ4] Domain organization of [ATPE_GEOKA] by SWISSPFAM

Other resources with information on 2E5Y

Community annotation for 2E5Y at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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