2E61 Structural Genomics, Unknown Function date Dec 25, 2006
title Solution Structure Of The Zf-Cw Domain In Zinc Finger Cw-Typ Domain Protein 1
authors F.He, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyama, Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Zinc Finger Cw-Type Pwwp Domain Protein 1
Chain: A
Fragment: Zf-Cw Domain, Unp Residues 246-307
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Zcwpw1
Expression_system: Cell Free Synthsis
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060116-12
Other_details: E. Coli - Cell Free
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural insight into the zinc finger CW domain as a histone modification reader., He F, Umehara T, Saito K, Harada T, Watanabe S, Yabuki T, Kigawa T, Takahashi M, Kuwasako K, Tsuda K, Matsuda T, Aoki M, Seki E, Kobayashi N, Guntert P, Yokoyama S, Muto Y, Structure. 2010 Sep 8;18(9):1127-39. PMID:20826339
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (340 Kb) [Save to disk]
  • Biological Unit Coordinates (2e61.pdb1.gz) 18 Kb
  • LPC: Ligand-Protein Contacts for 2E61
  • CSU: Contacts of Structural Units for 2E61
  • Original NMR restraints for 2E61 from PDB
  • Retrieve 2E61 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2E61 from S2C, [Save to disk]
  • View 2E61 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2E61
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2E61, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2e61_A] [2e61]
  • SWISS-PROT database: [Q9H0M4]
  • Domain organization of [ZCPW1_HUMAN] by SWISSPFAM
  • Other resources with information on 2E61
  • Community annotation for 2E61 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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