2EBL Transcription date Feb 09, 2007
title Solution Structure Of The Zinc Finger, C4-Type Domain Of Hum Transcription Factor 1
authors M.Yoneyama, S.Koshiba, S.Watabe, T.Harada, T.Kigawa, S.Yokoyama, R Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Coup Transcription Factor 1
Chain: A
Fragment: Zinc Finger, C4-Type
Synonym: Coup-Tf1, Coup-Tf I, V-Erba-Related Protein Ear-3
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Nr2f1, Ear3, Erbal3, Tfcoup1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P051212-03
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (454 Kb) [Save to disk]
  • Biological Unit Coordinates (2ebl.pdb1.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 2EBL
  • CSU: Contacts of Structural Units for 2EBL
  • Retrieve 2EBL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EBL from S2C, [Save to disk]
    • View 2EBL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2EBL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EBL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ebl_A] [2ebl]
  • SWISS-PROT database: [P10589]
  • Domain organization of [COT1_HUMAN] by SWISSPFAM
  • Domain found in 2EBL: [ZnF_C4 ] by SMART
    • Other resources with information on 2EBL
  • Community annotation for 2EBL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science