2EC0	Transferase Rna	date	Feb 09, 2007
title	Rna-Dependent Rna Polymerase Of Foot-And-Mouth Disease Virus Complex With A Template-Primer Rna And Atp
authors	C.Ferrer-Orta, A.Arias, R.Perez-Luque, C.Escarmis, E.Domingo, N.V
compound		source
Molecule: 5'-R(Papupgpgpgpcpcpc)-3' Chain: B, E Engineered: Yes Other_details: Rna Template		Synthetic: Yes
Molecule: 5'-R(Gpgpgpcpcpcpa)-3' Chain: C, F Engineered: Yes Other_details: Rna Primer		Synthetic: Yes
Molecule: Rna-Dependent Rna Polymerase Chain: A, D Ec: 2.7.7.48 Engineered: Yes		Organism_scientific: Foot-And-Mouth Disease Virus C-S8c1 Organism_taxid: 244367 Strain: C-S8c1 Gene: 3d Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-28a
symmetry	Space Group: P 31 2 1	R_factor 0.245 R_Free 0.295
crystal cell	length a length b length c angle alpha angle beta angle gamma 95.656 95.656 201.458 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.75 Å
ligand	MG, PPV	enzyme	Transferase E.C.2.7.7.48 BRENDA
Gene Ontology	Chain Function Process Component A, D
Primary reference	Sequential structures provide insights into the fidelity of RNA replication., Ferrer-Orta C, Arias A, Perez-Luque R, Escarmis C, Domingo E, Verdaguer N, Proc Natl Acad Sci U S A. 2007 May 29;104(22):9463-8. Epub 2007 May 21. PMID:17517631

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk] Biological Unit Coordinates (2ec0.pdb1.gz) 83 Kb Biological Unit Coordinates (2ec0.pdb2.gz) 83 Kb LPC: Ligand-Protein Contacts for 2EC0 CSU: Contacts of Structural Units for 2EC0 Likely Quarternary Molecular Structure file(s) for 2EC0 Structure Factors (222 Kb) Retrieve 2EC0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2EC0 from S2C, [Save to disk] Re-refined 2ec0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2EC0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2EC0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2EC0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ec0_A] [2ec0] [2ec0_B] [2ec0_F] [2ec0_C] [2ec0_E] [2ec0_D] SWISS-PROT database: [Q0QEE1] Domain organization of [Q0QEE1_9PICO] by SWISSPFAM

Other resources with information on 2EC0

Community annotation for 2EC0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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