2ECB Transcription date Feb 13, 2007
title The Solution Structure Of The Third Homeobox Domain Of Human Fingers And Homeoboxes Protein
authors S.Ohnishi, N.Tochio, A.Sasagawa, K.Saito, S.Koshiba, M.Inoue, T.Ki S.Yokoyama, Riken Structural Genomicsproteomics Initiative
compound source
Molecule: Zinc Fingers And Homeoboxes Protein 1
Chain: A
Fragment: Homeobox Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Zhx1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050404-21
Other_details: Cell Free Protein Synthesis
methodSolution NMR
note 2ECB supersedes 2DJO
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (463 Kb) [Save to disk]
  • Biological Unit Coordinates (2ecb.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 2ECB
  • Retrieve 2ECB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ECB from S2C, [Save to disk]
  • View 2ECB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ECB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ECB, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ecb_A] [2ecb]
  • SWISS-PROT database: [Q9UKY1]
  • Domain organization of [ZHX1_HUMAN] by SWISSPFAM
  • Domain found in 2ECB: [HOX ] by SMART
  • Other resources with information on 2ECB
  • Community annotation for 2ECB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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