2EGC Signaling Protein date Feb 28, 2007
title Solution Structure Of The Fifth Sh3 Domain From Human Kiaa04
authors K.Inoue, C.Kurosaki, M.Yoshida, F.Hayashi, S.Yokoyama, Riken Stru Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Sh3 And Px Domain-Containing Protein 2a
Chain: A
Fragment: Sh3 Domain
Synonym: Sh3 Multiple Domains Protein 1, Five Sh3 Domain-Co Protein, Adaptor Protein Tks5, Kiaa0418 Protein;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sh3pxd2a, Fish, Kiaa0418, Sh3md1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050919-09
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (369 Kb) [Save to disk]
  • Biological Unit Coordinates (2egc.pdb1.gz) 18 Kb
  • CSU: Contacts of Structural Units for 2EGC
  • Retrieve 2EGC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EGC from S2C, [Save to disk]
    • View 2EGC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2EGC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EGC, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2egc_A] [2egc]
  • SWISS-PROT database: [Q5TCZ1]
  • Domain organization of [SPD2A_HUMAN] by SWISSPFAM
  • Domain found in 2EGC: [SH3 ] by SMART
    • Other resources with information on 2EGC
  • Community annotation for 2EGC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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