2EHO Replication date Mar 07, 2007
title Crystal Structure Of Human Gins Complex
authors J.M.Choi, H.S.Lim, J.J.Kim, O.K.Song, Y.Cho
compound source
Molecule: Gins Complex Subunit 4
Chain: A, E, I
Fragment: Sld5
Synonym: Sld5 Homolog
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pacyc-Duet

Molecule: Dna Replication Complex Gins Protein Psf1
Chain: B, F, J
Fragment: Psf1
Synonym: Psf1
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Psf1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcdf-Duet

Molecule: Dna Replication Complex Gins Protein Psf2
Chain: C, G, K
Synonym: Psf2
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Psf2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-Duet

Molecule: Gins Complex Subunit 3
Chain: D, H, L
Fragment: Psf3
Synonym: Psf3 Homolog
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Psf3
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcola-Duet
symmetry Space Group: C 1 2 1
R_factor 0.221 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
164.935 176.995 126.508 90.00 105.91 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand MSE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, E, I
  • 3'-5' DNA helicase activity


  • F, J, B


    H, D, L


    K, C, G
  • 3'-5' DNA helicase activity


  • Primary referenceCrystal structure of the human GINS complex., Choi JM, Lim HS, Kim JJ, Song OK, Cho Y, Genes Dev. 2007 Jun 1;21(11):1316-21. PMID:17545466
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (358 Kb) [Save to disk]
  • Biological Unit Coordinates (2eho.pdb1.gz) 113 Kb
  • Biological Unit Coordinates (2eho.pdb2.gz) 121 Kb
  • Biological Unit Coordinates (2eho.pdb3.gz) 122 Kb
  • LPC: Ligand-Protein Contacts for 2EHO
  • CSU: Contacts of Structural Units for 2EHO
  • Likely Quarternary Molecular Structure file(s) for 2EHO
  • Structure Factors (580 Kb)
  • Retrieve 2EHO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EHO from S2C, [Save to disk]
  • Re-refined 2eho structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2EHO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2EHO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2EHO, from MSDmotif at EBI
  • Fold representative 2eho from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2eho_A] [2eho_H] [2eho_E] [2eho_F] [2eho] [2eho_J] [2eho_I] [2eho_C] [2eho_D] [2eho_G] [2eho_L] [2eho_B] [2eho_K]
  • SWISS-PROT database: [Q14691] [Q9Y248] [Q9BRX5] [Q9BRT9]
  • Domain organization of [PSF1_HUMAN] [PSF2_HUMAN] [PSF3_HUMAN] [SLD5_HUMAN] by SWISSPFAM
  • Other resources with information on 2EHO
  • Community annotation for 2EHO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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