2EKH Signaling Protein date Mar 23, 2007
title Solution Structures Of The Sh3 Domain Of Human Kiaa0418
authors M.Sato, N.Tochio, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Sh3 And Px Domain-Containing Protein 2a
Chain: A
Fragment: Sh3 Domain
Synonym: Kiaa0418 Protein, Sh3 Multiple Domains Protein 1, Domain-Containing Protein, Adaptor Protein Tks5;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kiaa0418
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050919-08
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (388 Kb) [Save to disk]
  • Biological Unit Coordinates (2ekh.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 2EKH
  • Original NMR restraints for 2EKH from PDB
  • Retrieve 2EKH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EKH from S2C, [Save to disk]
    • View 2EKH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2EKH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EKH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ekh_A] [2ekh]
  • SWISS-PROT database: [Q5TCZ1]
  • Domain organization of [SPD2A_HUMAN] by SWISSPFAM
  • Domain found in 2EKH: [SH3 ] by SMART
    • Other resources with information on 2EKH
  • Community annotation for 2EKH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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