2EKK Protein Binding date Mar 23, 2007
title Solution Structure Of Ruh-074, A Human Uba Domain
authors S.Kitasaka, A.Z.M.Ruhul Momen, H.Hirota, Y.Muto, S.Yokoyama, Rike Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Uba Domain From E3 Ubiquitin-Protein Ligase Huwe1
Chain: A
Synonym: Hect, Uba And Wwe Domain-Containing Protein 1, Ure Ubiquitin Ligase E3, Mule, Arf-Binding Protein 1, Arf-Bp1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060529-20
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (232 Kb) [Save to disk]
  • Biological Unit Coordinates (2ekk.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 2EKK
  • Original NMR restraints for 2EKK from PDB
  • Retrieve 2EKK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EKK from S2C, [Save to disk]
  • View 2EKK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2EKK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EKK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ekk] [2ekk_A]
  • SWISS-PROT database: [Q7Z6Z7]
  • Domain organization of [HUWE1_HUMAN] by SWISSPFAM
  • Domain found in 2EKK: [UBA ] by SMART
  • Other resources with information on 2EKK
  • Community annotation for 2EKK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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