2EO9 Cell Adhesion date Mar 29, 2007
title Solution Structure Of The Fifth Ig-Like Domain From Human Ro Homo1
authors K.Nagashima, M.Yoshida, F.Hayashi, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Roundabout Homolog 1
Chain: A
Fragment: Ig-Like
Synonym: H-Robo-1, Deleted In U Twenty Twenty
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Robo1
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P061002-22
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (589 Kb) [Save to disk]
  • Biological Unit Coordinates (2eo9.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 2EO9
  • Original NMR restraints for 2EO9 from PDB
  • Retrieve 2EO9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EO9 from S2C, [Save to disk]
    • View 2EO9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2EO9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EO9, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2eo9_A] [2eo9]
  • SWISS-PROT database: [Q9Y6N7]
  • Domain organization of [ROBO1_HUMAN] by SWISSPFAM
  • Domain found in 2EO9: [IGc2 ] by SMART
    • Other resources with information on 2EO9
  • Community annotation for 2EO9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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