2EP4 Protein Binding date Mar 29, 2007
title Solution Structure Of Ring Finger From Human Ring Finger Protein 24
authors T.Nagashima, F.Hayashi, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Ring Finger Protein 24
Chain: A
Fragment: Zf-C3hc4
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rnf24
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060828-23
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (383 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 2EP4
  • CSU: Contacts of Structural Units for 2EP4
  • Original NMR restraints for 2EP4 from PDB
  • Retrieve 2EP4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EP4 from S2C, [Save to disk]
  • View 2EP4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2EP4
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2EP4, from MSDmotif at EBI
  • Fold representative 2ep4 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ep4_A] [2ep4]
  • SWISS-PROT database: [Q9Y225]
  • Domain organization of [RNF24_HUMAN] by SWISSPFAM
  • Domain found in 2EP4: [RING ] by SMART
  • Other resources with information on 2EP4
  • Community annotation for 2EP4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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