2EQG Hydrolase date Mar 30, 2007
title Solution Structure Of The First A20-Type Zinc Finger Domain From Human Tumor Necrosis Factor, Alpha-Induced Protein3
authors H.P.Zhang, F.Hayahsi, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Tumor Necrosis Factor, Alpha-Induced Protein 3
Chain: A
Fragment: A20-Type Zinc Finger Domain
Synonym: Putative Dna-Binding Protein A20, Zinc Finger Protein A20;
Ec: 3.-.-.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tnfaip3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P070115-04
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme Hydrolase E.C.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (232 Kb) [Save to disk]
  • LPC: Ligand-Protein Contacts for 2EQG
  • CSU: Contacts of Structural Units for 2EQG
  • Retrieve 2EQG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EQG from S2C, [Save to disk]
  • View 2EQG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2EQG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2EQG, from MSDmotif at EBI
  • Fold representative 2eqg from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2eqg_A] [2eqg]
  • SWISS-PROT database: [P21580]
  • Domain organization of [TNAP3_HUMAN] by SWISSPFAM
  • Domain found in 2EQG: [ZnF_A20 ] by SMART
  • Other resources with information on 2EQG
  • Community annotation for 2EQG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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