2EQK Transcription date Mar 30, 2007
title Solution Structure Of The Tudor Domain Of Tudor Domain-Conta Protein 4
authors W.Dang, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyam Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Tudor Domain-Containing Protein 4
Chain: A
Fragment: Tudor Domain
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tdrd4
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060911-18
Other_details: Cell Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (456 Kb) [Save to disk]
  • Biological Unit Coordinates (2eqk.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 2EQK
  • Original NMR restraints for 2EQK from PDB
  • Retrieve 2EQK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EQK from S2C, [Save to disk]
    • View 2EQK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2EQK
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EQK, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2eqk_A] [2eqk]
  • SWISS-PROT database: [Q9BXT8]
  • Domain organization of [RNF17_HUMAN] by SWISSPFAM
  • Domain found in 2EQK: [TUDOR ] by SMART
    • Other resources with information on 2EQK
  • Community annotation for 2EQK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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