2EQP Transcription date Mar 30, 2007
title Solution Structure Of The Stn_tnfrsf12a_tnfr Domain Of Tumor Factor Receptor Superfamily Member 12a Precursor
authors W.Dang, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyam Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Tumor Necrosis Factor Receptor Superfamily Member
Chain: A
Fragment: Stn_tnfrsf12a_tnfr Domain, Unp Residues 28-70
Synonym: Fibroblast Growth Factor-Inducible Immediate-Early Protein 14, Fgf-Inducible 14, Tweak-Receptor, Tweakr, Cd266
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Tnfrsf12a
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060919-17
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (217 Kb) [Save to disk]
  • Biological Unit Coordinates (2eqp.pdb1.gz) 11 Kb
  • CSU: Contacts of Structural Units for 2EQP
  • Original NMR restraints for 2EQP from PDB
  • Retrieve 2EQP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EQP from S2C, [Save to disk]
  • View 2EQP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2EQP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EQP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2eqp_A] [2eqp]
  • SWISS-PROT database: [Q9NP84]
  • Domain organization of [TNR12_HUMAN] by SWISSPFAM
  • Other resources with information on 2EQP
  • Community annotation for 2EQP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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