2EUM	Lipid Transport	date	Oct 28, 2005
title	Crystal Structure Of Human Glycolipid Transfer Protein Compl 8:0 Lactosylceramide
authors	L.Malinina, M.L.Malakhova, A.T.Kanack, R.Abagyan, R.E.Brown, D.J.
compound		source
Molecule: Glycolipid Transfer Protein Chain: A Synonym: Gltp Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet30 Xa-Lic
symmetry	Space Group: C 1 2 1	R_factor 0.184 R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma 75.509 49.264 68.660 90.00 122.57 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	BGC, D10, GAL, OCA, OCT, SPH	enzyme
Gene Ontology	Chain Function Process Component A glycolipid transporter activ... ceramide 1-phosphate transpo...
Primary reference	The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure., Malinina L, Malakhova ML, Kanack AT, Lu M, Abagyan R, Brown RE, Patel DJ, PLoS Biol. 2006 Nov;4(11):e362. PMID:17105344

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk] Biological Unit Coordinates (2eum.pdb1.gz) 38 Kb LPC: Ligand-Protein Contacts for 2EUM CSU: Contacts of Structural Units for 2EUM Likely Quarternary Molecular Structure file(s) for 2EUM Structure Factors (70 Kb) Retrieve 2EUM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2EUM from S2C, [Save to disk] Re-refined 2eum structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2EUM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2EUM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2EUM, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2eum] [2eum_A] SWISS-PROT database: [Q9NZD2] Domain organization of [GLTP_HUMAN] by SWISSPFAM

Other resources with information on 2EUM

Community annotation for 2EUM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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