2EZZ Dna Binding Protein date Jul 26, 1998
title Solution Structure Of Human Barrier-To-Autointegration Facto Ensemble Of 20 Simulated Annealing Structures
authors G.M.Clore, M.Cai, A.M.Gronenborn
compound source
Molecule: Barrier-To-Autointegration Factor
Chain: A, B
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
related structures by homologous chain: 2EZY
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceSolution structure of the cellular factor BAF responsible for protecting retroviral DNA from autointegration., Cai M, Huang Y, Zheng R, Wei SQ, Ghirlando R, Lee MS, Craigie R, Gronenborn AM, Clore GM, Nat Struct Biol 1998 Oct;5(10):903-9. PMID:9783751
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (937 Kb) [Save to disk]
  • Biological Unit Coordinates (2ezz.pdb1.gz) 46 Kb
  • CSU: Contacts of Structural Units for 2EZZ
  • Retrieve 2EZZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EZZ from S2C, [Save to disk]
    • View 2EZZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2EZZ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EZZ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2ezza_, region A [Jmol] [rasmolscript] [script source]
        - Domain d2ezzb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ezz_B] [2ezz] [2ezz_A]
  • SWISS-PROT database: [O75531]
  • Domain organization of [BAF_HUMAN] by SWISSPFAM
  • Domain found in 2EZZ: [BAF ] by SMART
    • Other resources with information on 2EZZ
  • Community annotation for 2EZZ at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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