2F1U Signaling Protein Receptor date Nov 15, 2005
title A Homology-Based 3d Model Of The Human Neuropeptide Y Receptor Y1
authors P.Sjodin, H.Akerberg, D.Larhammar
compound source
Molecule: Neuropeptide Y Receptor Type 1
Chain: A
Synonym: Npy1-R
Organism_scientific: Homo Sapiens
Organism_common: Human

Molecule: Neuropeptide Y Receptor Type 1
Chain: B
Synonym: Npy1-R

Organism_scientific: Homo Sapiens
Organism_common: Human

Molecule: Neuropeptide Y Receptor Type 1
Chain: C
Synonym: Npy1-R

Organism_scientific: Homo Sapiens
Organism_common: Human

Molecule: Neuropeptide Y Receptor Type 1
Chain: D
Synonym: Npy1-R

Organism_scientific: Homo Sapiens
Organism_common: Human

Molecule: Neuropeptide Y Receptor Type 1
Chain: E
Synonym: Npy1-R

Organism_scientific: Homo Sapiens
Organism_common: Human

Molecule: Neuropeptide Y Receptor Type 1
Chain: F
Synonym: Npy1-R

Organism_scientific: Homo Sapiens
Organism_common: Human

Molecule: Neuropeptide Y Receptor Type 1
Chain: G
Synonym: Npy1-R

Organism_scientific: Homo Sapiens
Organism_common: Human
methodTheoretical Model
Primary referenceRe-evaluation of receptor-ligand interactions of the human neuropeptide Y receptor Y1: a site-directed mutagenesis study., Sjodin P, Holmberg SK, Akerberg H, Berglund MM, Mohell N, Larhammar D, Biochem J. 2006 Jan 1;393(Pt 1):161-9. PMID:16097949
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 2F1U
  • View 2F1U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2F1U
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 2f1u from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • SWISS-PROT database: [P25929]
  • Domain organization of [NPY1R_HUMAN] by SWISSPFAM
  • Other resources with information on 2F1U
  • Community annotation for 2F1U at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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