2F1W	Hydrolase	date	Nov 15, 2005
title	Crystal Structure Of The Traf-Like Domain Of Hauspusp7
authors	M.Hu, L.Gu, P.D.Jeffrey, Y.Shi
compound		source
Molecule: Ubiquitin Carboxyl-Terminal Hydrolase 7 Chain: A Fragment: N-Terminal Fragment (Residues : 53-206) Synonym: Ubiquitin Thiolesterase 7, Ubiquitin-Specific Proc Protease 7, Deubiquitinating Enzyme 7, Herpesvirus Associat Ubiquitin-Specific Protease; Ec: 3.1.2.15 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Usp7, Hausp Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pgex-2t
symmetry	Space Group: P 21 21 21	R_factor 0.194 R_Free 0.212
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.172 52.242 63.651 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.65 Å
ligand	CA	enzyme	Hydrolase E.C.3.1.2.15 BRENDA
Primary reference	Structural Basis of Competitive Recognition of p53 and MDM2 by HAUSP/USP7: Implications for the Regulation of the p53-MDM2 Pathway., Hu M, Gu L, Li M, Jeffrey PD, Gu W, Shi Y, PLoS Biol. 2006 Feb;4(2):e27. Epub 2006 Jan 17. PMID:16402859

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk] Biological Unit Coordinates (2f1w.pdb1.gz) 27 Kb LPC: Ligand-Protein Contacts for 2F1W CSU: Contacts of Structural Units for 2F1W Likely Quarternary Molecular Structure file(s) for 2F1W Retrieve 2F1W in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2F1W from S2C, [Save to disk]

View 2F1W in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2F1W

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2F1W, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2f1w] [2f1w_A] SWISS-PROT database: [Q93009] Domain organization of [UBP7_HUMAN] by SWISSPFAM Domain found in 2F1W: [MATH ] by SMART

Other resources with information on 2F1W

Community annotation for 2F1W at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---