2F3I Transferase date Nov 21, 2005
title Solution Structure Of A Subunit Of Rna Polymerase II
authors X.Kang, C.Jin
compound source
Molecule: Dna-Directed Rna Polymerases I, II, And III 17.1 Polypeptide;
Chain: A
Synonym: Rna Polymerase II Subunit, Rpb17, Rpb8, Rpabc3
Ec: 2.7.7.6
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet24a
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.7.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural, biochemical, and dynamic characterizations of the hRPB8 subunit of human RNA polymerases., Kang X, Hu Y, Li Y, Guo X, Jiang X, Lai L, Xia B, Jin C, J Biol Chem. 2006 Jun 30;281(26):18216-26. Epub 2006 Apr 21. PMID:16632472
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (837 Kb) [Save to disk]
  • Biological Unit Coordinates (2f3i.pdb1.gz) 39 Kb
  • CSU: Contacts of Structural Units for 2F3I
  • Original NMR restraints for 2F3I from PDB
  • Retrieve 2F3I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2F3I from S2C, [Save to disk]
    • View 2F3I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2F3I
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2F3I, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2f3i_A] [2f3i]
  • SWISS-PROT database: [P52434]
  • Domain organization of [RPAB3_HUMAN] by SWISSPFAM
  • Domain found in 2F3I: [RPOL8c ] by SMART
    • Other resources with information on 2F3I
  • Community annotation for 2F3I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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