OCA Atlas for 2F5K

2F5K

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
B, A, F, D, C, E

Primary reference

Structure of human MRG15 chromo domain and its binding to Lys36-methylated histone H3., Zhang P, Du J, Sun B, Dong X, Xu G, Zhou J, Huang Q, Liu Q, Hao Q, Ding J, Nucleic Acids Res. 2006;34(22):6621-8. Epub 2006 Nov 28. PMID:17135209

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (184 Kb) [Save to disk]

Biological Unit Coordinates (2f5k.pdb1.gz) 31 Kb

Biological Unit Coordinates (2f5k.pdb2.gz) 33 Kb

Biological Unit Coordinates (2f5k.pdb3.gz) 31 Kb

Biological Unit Coordinates (2f5k.pdb4.gz) 30 Kb

Biological Unit Coordinates (2f5k.pdb5.gz) 30 Kb

Biological Unit Coordinates (2f5k.pdb6.gz) 30 Kb

CSU: Contacts of Structural Units for 2F5K

Likely Quarternary Molecular Structure file(s) for 2F5K

Structure Factors (471 Kb)

Retrieve 2F5K in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2F5K from S2C, [Save to disk]

Re-refined 2f5k structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2F5K in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2f5k] [2f5k_A] [2f5k_B] [2f5k_C] [2f5k_D] [2f5k_E] [2f5k_F]

SWISS-PROT database: [Q9UBU8]

Domain found in 2F5K: [CHROMO ] by SMART

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