2F90 Isomerase date Dec 05, 2005
title Crystal Structure Of Bisphosphoglycerate Mutase In Complex W Phosphoglycerate And Alf4-
authors Y.Wang, L.Liu, Z.Wei, W.Gong
compound source
Molecule: Bisphosphoglycerate Mutase
Chain: A, B
Synonym: 2,3-Bisphosphoglycerate Mutase, Erythrocyte, 2,3- Bisphosphoglycerate Synthase, Bpgm, Bpg-Dependent Pgam;
Ec: 5.4.2.4, 5.4.2.1, 3.1.3.13
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
symmetry Space Group: P 21 21 21
R_factor 0.183 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.351 71.652 158.772 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand 3PG, ALF enzyme Isomerase E.C.5.4.2.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceSeeing the process of histidine phosphorylation in human bisphosphoglycerate mutase., Wang Y, Liu L, Wei Z, Cheng Z, Lin Y, Gong W, J Biol Chem. 2006 Dec 22;281(51):39642-8. Epub 2006 Oct 18. PMID:17052986
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (2f90.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 2F90
  • CSU: Contacts of Structural Units for 2F90
  • Likely Quarternary Molecular Structure file(s) for 2F90
  • Structure Factors (863 Kb)
  • Retrieve 2F90 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2F90 from S2C, [Save to disk]
  • Re-refined 2f90 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2F90 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2F90
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2F90, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2f90] [2f90_B] [2f90_A]
  • SWISS-PROT database: [P07738]
  • Domain organization of [PMGE_HUMAN] by SWISSPFAM
  • Domain found in 2F90: [PGAM ] by SMART
  • Other resources with information on 2F90
  • Community annotation for 2F90 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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