2F9W Transferase date Dec 06, 2005
title Structure Of The Type III Coaa From Pseudomonas Aeruginosa
authors R.Leonardi, M.K.Yun, S.Chohnan, S.W.White, C.O.Rock, S.Jackowski
compound source
Molecule: Pantothenate Kinase
Chain: A, B
Ec: 2.7.1.33
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 208964
Strain: Pao1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-28a
symmetry Space Group: P 41 21 2
R_factor 0.210 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
90.667 90.667 179.194 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand EDO, GOL, MSE, PAU enzyme Transferase E.C.2.7.1.33 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceProkaryotic Type II and Type III Pantothenate Kinases: The Same Monomer Fold Creates Dimers with Distinct Catalytic Properties., Hong BS, Yun MK, Zhang YM, Chohnan S, Rock CO, White SW, Jackowski S, Park HW, Leonardi R, Structure. 2006 Aug;14(8):1251-61. PMID:16905099
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (2f9w.pdb1.gz) 83 Kb
  • LPC: Ligand-Protein Contacts for 2F9W
  • CSU: Contacts of Structural Units for 2F9W
  • Likely Quarternary Molecular Structure file(s) for 2F9W
  • Structure Factors (867 Kb)
  • Retrieve 2F9W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2F9W from S2C, [Save to disk]
  • Re-refined 2f9w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2F9W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2F9W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2F9W, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2f9w] [2f9w_A] [2f9w_B]
  • SWISS-PROT database: [Q9HWC1]
  • Domain organization of [COAX_PSEAE] by SWISSPFAM
  • Other resources with information on 2F9W
  • Community annotation for 2F9W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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