2FB7 Structural Genomics, Unknown Function date Dec 08, 2005
title Nmr Solution Structure Of Protein From Zebra Fish Dr.13312
authors R.C.Tyler, J.Song, J.L.Markley, Center For Eukaryotic Structura Genomics (Cesg)
compound source
Molecule: Sm-Like Protein, Lsm-14_n (Rap55)
Chain: A
Engineered: Yes
 Organism_scientific: Danio Rerio
Organism_common: Zebrafish
Organism_taxid: 7955
Gene: Bc055387
Expression_system: Cell-Free Synthesis
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Peu-His
Other_details: Wheat Germ Cell-Free, In Vitro Expression
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (247 Kb) [Save to disk]
  • Biological Unit Coordinates (2fb7.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 2FB7
  • Original NMR restraints for 2FB7 from PDB
  • Retrieve 2FB7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FB7 from S2C, [Save to disk]
    • View 2FB7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FB7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FB7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fb7] [2fb7_A]
  • SWISS-PROT database: [Q6P111]
  • Domain organization of [Q6P111_DANRE] by SWISSPFAM
  • Domain found in 2FB7: [LSM14 ] by SMART
    • Other resources with information on 2FB7
  • Community annotation for 2FB7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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