2FCJ Structural Genomics, Unknown Function date Dec 12, 2005
title Structure Of Small Toprim Domain Protein From Bacillus Stearothermophilus.
authors P.Rezacova, Y.Chen, D.Borek, F.Collart, A.Joachimiak, Z.Otwinowsk Center For Structural Genomics (Mcsg)
compound source
Molecule: Small Toprim Domain Protein
Chain: A, B, C
Engineered: Yes
 Organism_scientific: Geobacillus Stearothermophilus
Organism_taxid: 1422
Gene: Rbstp2199
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.192 R_Free 0.214
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.617 72.720 116.299 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.30 Å
ligand GOL, MES, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceCrystal structure and putative function of small Toprim domain-containing protein from Bacillus stearothermophilus., Rezacova P, Borek D, Moy SF, Joachimiak A, Otwinowski Z, Proteins. 2008 Feb 1;70(2):311-9. PMID:17705269
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (2fcj.pdb1.gz) 23 Kb
  • Biological Unit Coordinates (2fcj.pdb2.gz) 24 Kb
  • Biological Unit Coordinates (2fcj.pdb3.gz) 24 Kb
  • Biological Unit Coordinates (2fcj.pdb4.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 2FCJ
  • CSU: Contacts of Structural Units for 2FCJ
  • Likely Quarternary Molecular Structure file(s) for 2FCJ
  • Structure Factors (502 Kb)
  • Retrieve 2FCJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FCJ from S2C, [Save to disk]
  • Re-refined 2fcj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2FCJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FCJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FCJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fcj_A] [2fcj_C] [2fcj_B] [2fcj]
  • SWISS-PROT database: [Q5KVJ9]
  • Domain organization of [Q5KVJ9_GEOKA] by SWISSPFAM
  • Domain found in 2FCJ: [TOPRIM ] by SMART
    • Other resources with information on 2FCJ
  • Community annotation for 2FCJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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