2FCS Structural Protein date Dec 12, 2005
title X-Ray Crystal Structure Of A Chemically Synthesized [L-Gln35 With A Cubic Space Group
authors D.Bang, A.V.Gribenko, V.Tereshko, A.A.Kossiakoff, S.B.Kent, G.I.M
compound source
Molecule: Ubiquitin
Chain: A, B
Fragment: Residues 1-76
Engineered: Yes
Mutation: Yes
 Synthetic: Yes
Other_details: The Protein Was Chemically Synthesized. The Of The Protein Can Be Naturally Found In Homo Sapiens (Huma
symmetry Space Group: P 43 3 2
R_factor 0.205 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.578 106.578 106.578 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand ACT, CD, SO4 enzyme
Primary referenceDissecting the energetics of protein alpha-helix C-cap termination through chemical protein synthesis., Bang D, Gribenko AV, Tereshko V, Kossiakoff AA, Kent SB, Makhatadze GI, Nat Chem Biol. 2006 Mar;2(3):139-43. Epub 2006 Jan 30. PMID:16446709
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (2fcs.pdb1.gz) 15 Kb
  • Biological Unit Coordinates (2fcs.pdb2.gz) 14 Kb
  • LPC: Ligand-Protein Contacts for 2FCS
  • CSU: Contacts of Structural Units for 2FCS
  • Likely Quarternary Molecular Structure file(s) for 2FCS
  • Structure Factors (289 Kb)
  • Retrieve 2FCS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FCS from S2C, [Save to disk]
  • Re-refined 2fcs structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2FCS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FCS
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FCS, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fcs_B] [2fcs] [2fcs_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2FCS: [UBQ ] by SMART
    • Other resources with information on 2FCS
  • Community annotation for 2FCS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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