2FD6		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	EDO, ETX, FUC, NAG, NDG, PG4, PGE, SO4	enzyme
Gene Ontology	Chain Function Process Component A L U
Primary reference	Structure of human urokinase plasminogen activator in complex with its receptor., Huai Q, Mazar AP, Kuo A, Parry GC, Shaw DE, Callahan J, Li Y, Yuan C, Bian C, Chen L, Furie B, Furie BC, Cines DB, Huang M, Science. 2006 Feb 3;311(5761):656-9. PMID:16456079

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (140 Kb) [Save to disk] Biological Unit Coordinates (2fd6.pdb1.gz) 133 Kb Biological Unit Coordinates (2fd6.pdb2.gz) 133 Kb LPC: Ligand-Protein Contacts for 2FD6 CSU: Contacts of Structural Units for 2FD6 Likely Quarternary Molecular Structure file(s) for 2FD6 Structure Factors (631 Kb) Retrieve 2FD6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2FD6 from S2C, [Save to disk] Re-refined 2fd6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2FD6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2fd6_L] [2fd6_U] [2fd6] [2fd6_A] [2fd6_H] SWISS-PROT database: [Q52L64] [Q924Q0] [Q03405] [P00749] Domains found in 2FD6: [IG_like] [IGv] [KR] [LU ] by SMART

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