2FF0	Hormone Growth Factor Dna	date	Dec 17, 2005
title	Solution Structure Of Steroidogenic Factor 1 Dna Binding Dom To Its Target Sequence In The Inhibin Alpha-Subunit Promote
authors	T.H.Little, Y.Zhang, C.K.Matulis, J.Weck, Z.Zhang, A.Ramachandran K.E.Mayo, I.Radhakrishnan
compound		source
Molecule: Ggctcagggccacag Chain: B Fragment: Inhibin Alpha-Subunit Promoter Engineered: Yes		Synthetic: Yes Other_details: The Dna Sequence Was Synthesized Via Automat Methods;
Molecule: Ctgtggccctgagcc Chain: C Fragment: Inhibin Alpha-Subunit Promoter Engineered: Yes		Synthetic: Yes Other_details: The Dna Sequence Was Synthesized Via Automat Methods;
Molecule: Steroidogenic Factor 1 Chain: A Fragment: Dna Binding Domain Synonym: Stf-1, Sf-1, Adrenal 4 Binding Protein, Steroid Ho Receptor Ad4bp, Fushi Tarazu Factor Homolog 1, Embryonal Lt Protein, Elp, Embryonal Long Terminal Repeat- Binding Prote Steroid Hydroxylase Positive Regulator; Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Nr5a1, Ftzf1 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmcsg7
method	Solution NMR
ligand	ZN	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Sequence-specific deoxyribonucleic Acid (DNA) recognition by steroidogenic factor 1: a helix at the carboxy terminus of the DNA binding domain is necessary for complex stability., Little TH, Zhang Y, Matulis CK, Weck J, Zhang Z, Ramachandran A, Mayo KE, Radhakrishnan I, Mol Endocrinol. 2006 Apr;20(4):831-43. Epub 2005 Dec 8. PMID:16339274

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (700 Kb) [Save to disk] Biological Unit Coordinates (2ff0.pdb1.gz) 43 Kb LPC: Ligand-Protein Contacts for 2FF0 CSU: Contacts of Structural Units for 2FF0 Original NMR restraints for 2FF0 from PDB Retrieve 2FF0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2FF0 from S2C, [Save to disk]

View 2FF0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2FF0

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2FF0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ff0_B] [2ff0_A] [2ff0_C] [2ff0] SWISS-PROT database: [P33242] Domain organization of [STF1_MOUSE] by SWISSPFAM Domain found in 2FF0: [ZnF_C4 ] by SMART

Other resources with information on 2FF0

Community annotation for 2FF0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---