2FH7	Hydrolase	date	Dec 23, 2005
title	Crystal Structure Of The Phosphatase Domains Of Human Ptp Si
authors	J.Alvarado, R.Udupi, D.Smith, J.Koss, S.R.Wasserman, S.Ozyurt, S.A A.Powell, M.C.Kearins, I.Rooney, M.Maletic, K.T.Bain, J.C.Freema M.Russell, D.A.Thompson, J.M.Sauder, S.K.Burley, S.C.Almo, New Y Research Center For Structural Genomics (Nysgxrc)
compound		source
Molecule: Receptor-Type Tyrosine-Protein Phosphatase S Chain: A Fragment: Cytoplasmic Phosphatase Domains Synonym: R-Ptp-S, Protein-Tyrosine Phosphatase Sigma, R-Ptp Ec: 3.1.3.48 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ptprs Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Codon+ Ril Expression_system_vector_type: Plasmid
symmetry	Space Group: P 61	R_factor 0.190 R_Free 0.238
crystal cell	length a length b length c angle alpha angle beta angle gamma 94.333 94.333 123.036 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand		enzyme	Hydrolase E.C.3.1.3.48 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural genomics of protein phosphatases., Almo SC, Bonanno JB, Sauder JM, Emtage S, Dilorenzo TP, Malashkevich V, Wasserman SR, Swaminathan S, Eswaramoorthy S, Agarwal R, Kumaran D, Madegowda M, Ragumani S, Patskovsky Y, Alvarado J, Ramagopal UA, Faber-Barata J, Chance MR, Sali A, Fiser A, Zhang ZY, Lawrence DS, Burley SK, J Struct Funct Genomics. 2007 Sep;8(2-3):121-40. Epub 2007 Dec 5. PMID:18058037

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk] Biological Unit Coordinates (2fh7.pdb1.gz) 100 Kb CSU: Contacts of Structural Units for 2FH7 Likely Quarternary Molecular Structure file(s) for 2FH7 Structure Factors (322 Kb) Retrieve 2FH7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2FH7 from S2C, [Save to disk] Re-refined 2fh7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2FH7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2FH7

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2FH7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2fh7] [2fh7_A] SWISS-PROT database: [Q13332] Domain organization of [PTPRS_HUMAN] by SWISSPFAM Domain found in 2FH7: [PTPc ] by SMART

Other resources with information on 2FH7

Community annotation for 2FH7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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