2FHY Hydrolase date Dec 27, 2005
title Structure Of Human Liver Fpbase Complexed With A Novel Benzo Allosteric Inhibitor
authors C.Abad-Zapatero
compound source
Molecule: Fructose-1,6-Bisphosphatase 1
Chain: A, D, H, L
Ec: 3.1.3.11
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Pet100d-Topo
Expression_system_plasmid: 6his-Xpress-Hufbp1-Pet100-D-Topo
symmetry Space Group: P 21 21 21
R_factor 0.225 R_Free 0.276
crystal
cell
length a length b length c angle alpha angle beta angle gamma
83.748 109.126 190.838 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.95 Å
ligand A37, MG BindingDB enzyme Hydrolase E.C.3.1.3.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
H, A, D, L


Primary referenceBenzoxazole benzenesulfonamides are novel allosteric inhibitors of fructose-1,6-bisphosphatase with a distinct binding mode., von Geldern TW, Lai C, Gum RJ, Daly M, Sun C, Fry EH, Abad-Zapatero C, Bioorg Med Chem Lett. 2006 Jan 24;. PMID:16442285
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (209 Kb) [Save to disk]
  • Biological Unit Coordinates (2fhy.pdb1.gz) 200 Kb
  • LPC: Ligand-Protein Contacts for 2FHY
  • CSU: Contacts of Structural Units for 2FHY
  • Likely Quarternary Molecular Structure file(s) for 2FHY
  • Retrieve 2FHY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FHY from S2C, [Save to disk]
  • View 2FHY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FHY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2FHY, from MSDmotif at EBI
  • Fold representative 2fhy from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fhy_D] [2fhy_A] [2fhy_H] [2fhy] [2fhy_L]
  • SWISS-PROT database: [P09467]
  • Domain organization of [F16P1_HUMAN] by SWISSPFAM
  • Other resources with information on 2FHY
  • Community annotation for 2FHY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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